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病毒基因组
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基因组编号 毒株名称 引用编号 病毒类型 物种名称 采样国家 采样时间 宿主 序列长度 发布时间 分离来源 物种ID 种名 属名 科名 数据源 采样单位 采样地址 提交者 提交者单位 覆盖度 有效碱基数量 有效碱基百分比
OEAV20547027 hCoV-19/deer/USA/DE-22-011177-005/2022 EPI_ISL_16429130 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2022-01-25 Odocoileus virginianus 29536 2023-01-06 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID USDA-NWRC Wildlife Services Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA 28225 95.56
OEAV20547028 hCoV-19/deer/USA/IL-22-010212-003/2022 EPI_ISL_16429124 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2022-01-17 Odocoileus virginianus 29811 2023-01-06 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID USDA-NWRC Wildlife Services Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA 29811 100.00
OEAV20547029 hCoV-19/deer/USA/IL-22-010212-018/2022 EPI_ISL_16429126 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2022-01-31 Odocoileus virginianus 29779 2023-01-06 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID USDA-NWRC Wildlife Services Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA 29226 98.14
OEAV20547030 hCoV-19/deer/USA/IL-22-010212-020/2022 EPI_ISL_16429127 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2022-02-03 Odocoileus virginianus 29754 2023-01-06 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID USDA-NWRC Wildlife Services Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA 29384 98.76
OEAV20547031 hCoV-19/deer/USA/KS-22-010212-002/2022 EPI_ISL_16429123 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2022-01-09 Odocoileus virginianus 29815 2023-01-06 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID USDA-NWRC Wildlife Services Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA 29815 100.00
OEAV20547036 hCoV-19/deer/USA/MN-22-013500-009/2022 EPI_ISL_16429141 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2022-02-03 Odocoileus virginianus 29749 2023-01-06 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID USDA-NWRC Wildlife Services Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA 29748 100.00
OEAV20547037 hCoV-19/deer/USA/MN-22-013500-018/2022 EPI_ISL_16429149 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2022-02-15 Odocoileus virginianus 29372 2023-01-06 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID USDA-NWRC Wildlife Services Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA 29088 99.03
OEAV20547038 hCoV-19/deer/USA/MN-22-013500-019/2022 EPI_ISL_16429150 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2022-02-16 Odocoileus virginianus 29399 2023-01-06 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID USDA-NWRC Wildlife Services Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA 29392 99.98
OEAV20547039 hCoV-19/deer/USA/MN-22-013500-032/2022 EPI_ISL_16429153 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2022-02-18 Odocoileus virginianus 29333 2023-01-06 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID USDA-NWRC Wildlife Services Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA 29330 99.99
OEAV20547040 hCoV-19/deer/USA/MO-22-013500-004/2021 EPI_ISL_16429137 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2021-12-10 Odocoileus virginianus 29839 2023-01-06 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID USDA-NWRC Wildlife Services Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA 29835 99.99
OEAV20547048 hCoV-19/deer/USA/NJ-22-011177-012/2022 EPI_ISL_16429131 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2022-01-20 Odocoileus virginianus 29775 2023-01-06 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID USDA-NWRC Wildlife Services Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA 28241 94.85
OEAV20547049 hCoV-19/deer/USA/NJ-22-011177-015/2022 EPI_ISL_16429132 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2022-02-07 Odocoileus virginianus 29824 2023-01-06 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID USDA-NWRC Wildlife Services Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA 29824 100.00
OEAV20547050 hCoV-19/deer/USA/NJ-22-011177-025/2022 EPI_ISL_16429134 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2022-02-14 Odocoileus virginianus 29390 2023-01-06 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID USDA-NWRC Wildlife Services Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA 28886 98.29
OEAV20547060 hCoV-19/deer/USA/OK-22-013500-008/2022 EPI_ISL_16429140 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2022-02-14 Odocoileus virginianus 29825 2023-01-06 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID USDA-NWRC Wildlife Services Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA 29823 99.99
OEAV20547066 hCoV-19/deer/USA/TN-22-010212-012/2021 EPI_ISL_16429125 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2021-12-12 Odocoileus virginianus 29789 2023-01-06 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID USDA-NWRC Wildlife Services Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA 29788 100.00
OEAV20547068 hCoV-19/deer/USA/TN-22-010212-026/2022 EPI_ISL_16429128 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2022-01-11 Odocoileus virginianus 29779 2023-01-06 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID USDA-NWRC Wildlife Services Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA 29276 98.31
OEAV20547069 hCoV-19/deer/USA/TN-22-011177-019/2022 EPI_ISL_16429133 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2022-01-11 Odocoileus virginianus 29777 2023-01-06 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID USDA-NWRC Wildlife Services Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA 29774 99.99
OEAV20547075 hCoV-19/deer/USA/WV-22-013500-014/2022 EPI_ISL_16429146 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2022-03-11 Odocoileus virginianus 29777 2023-01-06 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID USDA-NWRC Wildlife Services Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA 29766 99.96
OEAV20547076 hCoV-19/deer/USA/WV-22-013500-017/2022 EPI_ISL_16429148 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2022-03-15 Odocoileus virginianus 29376 2023-01-06 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID USDA-NWRC Wildlife Services Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA 27469 93.51
OEAV20547077 hCoV-19/deer/USA/WV-22-013500-020/2022 EPI_ISL_16429151 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2022-04-04 Odocoileus virginianus 29619 2023-01-06 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID USDA-NWRC Wildlife Services Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA 29346 99.08
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